Documentation
MAAGE Documentation
Comprehensive guides, tutorials, and reference materials for the Midwest Alliance for Applied Genomic Epidemiology platform.
Getting Started
New to MAAGE? Start here to learn the basics and get your environment set up for genomic analysis.
View all guidesData & Searches
Learn how to search, filter, and access genomic data across the MAAGE platform.
View all guidesAnalysis Tools
Discover the suite of genomic analysis tools available on the MAAGE platform.
View all toolsWorkspaces
Learn how to use workspaces to organize your data, analyses, and collaborate with others.
View all guidesAPI Reference
Comprehensive documentation for the MAAGE API to integrate with your own applications.
View API docsCommunity
Connect with the MAAGE community and find resources for collaboration and knowledge sharing.
View community resourcesFeatured Documentation
View allQuick Start Guide: From Zero to Analysis in 15 Minutes
A step-by-step guide to get you up and running with MAAGE quickly, from account creation to your first genomic analysis.
Comparative Genomics: Analyzing Pathogen Evolution
Learn how to use MAAGE's comparative genomics tools to track pathogen evolution and identify key genetic changes.
Getting Started with the MAAGE API
An introduction to the MAAGE API, including authentication, basic requests, and common use cases for integration.
Video Tutorials
View allGenomic Analysis Workflow
Step-by-step guide to analyzing genomic data using MAAGE's analysis tools.
Data Visualization Techniques
Learn how to create effective visualizations of genomic data for analysis and reporting.
Additional Resources
Community Forum
Join our community forum to ask questions, share insights, and connect with other MAAGE users.
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