H5N1 Surveillance
Private
Monitoring H5N1 avian influenza strains across the Midwest, with focus on potential zoonotic transmission events.
Created: Jan 20, 2024, 10:15 AM
Last updated: Apr 9, 2024, 04:30 PM
Files
| Name | Type | Size | Last Updated | Actions |
|---|---|---|---|---|
h5n1_samples_jan2024.fastq | sequence | 1.2 GB | Jan 20, 2024, 10:15 AM | |
h5n1_samples_mar2024.fastq | sequence | 1.5 GB | Mar 15, 2024, 09:20 AM | |
h5n1_reference.fasta | reference | 10 MB | Jan 20, 2024, 10:15 AM |
Analyses
H5N1 Assembly - Jan Samples
Completed
Type: assembly
Started: Jan 21, 2024, 08:30 AM
Completed: Jan 21, 2024, 10:45 AM
Results:
assembled_genomes.fasta
45 MB
assembly_report.pdf
3 MB
H5N1 Assembly - Mar Samples
Completed
Type: assembly
Started: Mar 16, 2024, 11:20 AM
Completed: Mar 16, 2024, 01:40 PM
Results:
assembled_genomes_mar.fasta
50 MB
assembly_report_mar.pdf
3.2 MB
Activity History
Created H5N1 Surveillance project
Jan 20, 2024, 10:15 AMby Sarah Johnson
Uploaded h5n1_samples_jan2024.fastq
Jan 20, 2024, 10:20 AMby Sarah Johnson
Started H5N1 Assembly - Jan Samples
Jan 21, 2024, 08:30 AMby Sarah Johnson
Completed H5N1 Assembly - Jan Samples
Jan 21, 2024, 10:45 AMby System
Uploaded h5n1_samples_mar2024.fastq
Mar 15, 2024, 09:20 AMby David Wilson
